YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: SAP12_ARATH
Organism: Arabidopsis thaliana
Length: 186 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SAP12_ARATH.

Description E-value Query
Range
Subject
Range
ZFN2B_MOUSE - AN1-type zinc finger protein 2B OS=Mus musculus GN=Zfand2b PE=1 SV=1
216.0 [0..7] [182..1]

Back

Predicted Domain #1
Region A:
Residues: [1-86]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGGGTEAFP DLGEHCQDPD CKLLDFLPFT CDGCKLVFCL EHRSYKSHNC PKSDHGSRTV  60
   61 SICETCSIAI ETTGFDEKGI KSLLEK

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 3.6
Match: 1wysA
Description: Solution structure of the first zf-AN1 domain of mouse RIKEN cDNA 2310008M20 protein
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [87-186]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HERSGDCDPN KKKKPTCPVK RCKEILTFAN NLTCKYCGVK FCLKHRFPTD HVCNKKIINT  60
   61 AGTSSRWNER FMEALSLRNQ KGCGRGSSVS SKSSPSVRSF 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 13.154902
Match: 1wfeA
Description: Solution structure of the 2nd zf-AN1 domain of mouse RIKEN cDNA 2310008M20 protein
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle