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View Structure Prediction Details

Protein: gi|9755715, gi|1...
Organism: Arabidopsis thaliana
Length: 112 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|9755715, gi|1....

Description E-value Query
Range
Subject
Range
gi|125811035, gi... - gi|54636903|gb|EAL26306.1| GA20520-PA [Drosophila pseudoobscura], gi|125811035|ref|XP_001361728.1| G...
159.0 [0..3] [111..230]

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Predicted Domain #1
Region A:
Residues: [1-112]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYKIKASFIT KPNATPEEIR GLLLTQGPIG ISVDLCGIFR QVYEFKGIYV LPEPKENMER  60
   61 HALIIVGFGT TKDSKLFFIV QNTWGTKWGF NGYARIIIKK TCPIFYVSEL VN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 33.30103
Match: 1fh0A
Description: (Pro)cathepsin V
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.529663942126259 bayes_pls_golite062009
hydrolase activity 0.16837900182603 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle