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View Structure Prediction Details

Protein: gi|15231678, gi|...
Organism: Arabidopsis thaliana
Length: 257 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15231678, gi|....

Description E-value Query
Range
Subject
Range
YIPF5_XENTR - Protein YIPF5 OS=Xenopus tropicalis GN=yipf5 PE=2 SV=1
211.0 [0..7] [257..8]

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Predicted Domain #1
Region A:
Residues: [1-93]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKDFPIPPV VFPTSGSSPA TANVQQRRVP TAPYQPPRQS SASSSIPFIP FEIGSAAVSM  60
   61 PAGPFDGTIA SSASFGRGVS ASFEDEEPLL DEL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [94-257]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GIHPDQIWKK TRSILNPFRI NQTVHKDSDL SGPIFLYLAL CLFQLLAGKI QFGVILGWVV  60
   61 VSSIFLYIVF NMLAGRNGNL NLHTCTSLVG YSLLPVVILS AVSLFVPQGA GPVRFVLGAA 120
  121 FVLWATRACS NLVVSLADGG EEHRGLISYA CFLIYTLFSL LVIF

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 44.366532
Match: PF04893.8
Description: No description for PF04893.8 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle