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View Structure Prediction Details

Protein: gi|15234049, gi|...
Organism: Arabidopsis thaliana
Length: 430 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15234049, gi|....

Description E-value Query
Range
Subject
Range
gi|91079784 - gi|91079784|ref|XP_967813.1| PREDICTED: similar to brain chitinase and chia [Tribolium castaneum]
293.0 [0..91] [423..1]

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Predicted Domain #1
Region A:
Residues: [1-430]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARRRRSSAA ESLKRRNDGY ESLCQVVQQD SDRRLITIFV IFFIVIPAVS IAVYKVKFAD  60
   61 RVIQTESSIR QKGIVKTDIN FQEILTEHSK ASENSTRHYD YPVLAYITPW NSKGYDMAKI 120
  121 FNSKFTHLSP VWYDLKSQGS GLVLEGRHNA DKGWIQELRS RGNALILPRV VLEAIPGEML 180
  181 NKKKLREKAI SLIVTECKEM EYNGIVLESW SRWAAYGVLH DPDLRKMALK FVKQLGDALH 240
  241 STSSPRNNQQ HMQFMYVVGP PRSEKLQMYD FGPEDLQFLK DSVDGFSLMT YDFSNPQNPG 300
  301 PNAPVKWIDL TLKLLLGSSN NIDSNIARKV LLGINFYGND FVISGDSGGG GAITGRDYLA 360
  361 LLQKHKPTFR WDKESGEHLF MYRDDKNIKH AVFYPTLMSI LLRLENARLW GIGISIWEIG 420
  421 QGLDYFFDLL 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 73.69897
Match: 1edqA
Description: Chitinase A, N-terminal domain N; Chitinase A, catalytic domain; Chitinase A
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.00445818053203 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle