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View Structure Prediction Details

Protein: gi|12322545, gi|...
Organism: Arabidopsis thaliana
Length: 444 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|12322545, gi|....

Description E-value Query
Range
Subject
Range
gi|186682529, gi... - gi|23129063|ref|ZP_00110897.1| COG1020: Non-ribosomal peptide synthetase modules and related protein...
295.0 [0..7] [366..1091]

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Predicted Domain #1
Region A:
Residues: [1-444]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIFDVSFTG EFIVKASGDQ PEKVNSLNLS NFDLLSGRFP VTYFYFYPKQ PQLSFETIVK  60
   61 SLQSSLSQTL SYFYPFAGQI VPNETSQEEP MIICNNNGAL FVEARAHVDL KSLDFYNLDA 120
  121 FLQSKLVQVN PDFSLQIQAT EFECGGLALT FTFDHALGDA SSFGKFLTLW SEISRNKPVS 180
  181 CVPDHRRNLL RARSPPRYDP HLDKTFIKCS EEDIKNIPMS KTLIKRLYHI GASSLDALQA 240
  241 LATVNGESRT KIEAFSAYVW KKMVDSIESG HKTCKMGWLV DGRGRLETVT SSYIGNVLSI 300
  301 AVGEASIENL KKNHVSDIAN IVHKSITEVT NDTHFTDLID WIESHRPGLM LARVVLGQEG 360
  361 PALVLSSGRR FPVAELDFGF GAPFLGTVCS TVEKIGVGYL NQRPSACNDG SWSVSAIVWP 420
  421 ELATALESDS VFQPMSAKHL QLQT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 50.69897
Match: 2bghA
Description: Crystal structure of Vinorine Synthase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle