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View Structure Prediction Details

Protein: gi|15217995, gi|...
Organism: Arabidopsis thaliana
Length: 660 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15217995, gi|....

Description E-value Query
Range
Subject
Range
gi|113565891, gi... - gi|50929789|ref|XP_474422.1| OSJNBa0088H09.18 [Oryza sativa (japonica cultivar-group)], gi|32488717|...
gi|218195860 - gi|218195860|gb|EEC78287.1| hypothetical protein OsI_17996 [Oryza sativa Indica Group]
588.0 [0..7] [630..1]

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Predicted Domain #1
Region A:
Residues: [1-71]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAESKRLERL KAMRSLLKSE MEKSETFSLV LNKTGSKIEE INHKLSSLEA DLKVERWKAS  60
   61 PFSDHIRHTI A

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [72-660]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PISAVLRVFA TVQELERSLV SSDGVLGYVS DVKRLGEAMK LLSSSCVLAL NWLEDTIEYL  60
   61 TEKGMPEDHP CGLRFKTSIE LLRELQMTES RAYLKGGILY TALKNLETEF KRILQEKPVF 120
  121 SEDNLRKLQA IIKRLHAHTR LTSCVPVYIK VRTKVIQKRF EISYLEKTIT EADNVHDIEG 180
  181 DIDQWRLHME IAVKEIYEFE SKLCYDVFED IGEDVPLRCF GEIASNSVIL QLLRFGSRIS 240
  241 KCKREPPKLI KLLDCFSTMD NFRIEFNRLF RGEQCSEIRR VTRELISNLV KGVSEIFWEL 300
  301 PCQVELQRPN CPPLDGGVPK LVSVVTEYCN KLLGNNNKPI LSKVLEIDLG WKNAKYQEEL 360
  361 LTGHIYNILR EIALNLDAWS SSNKETALSC IFMMNNHSHF CGLRETYLGE MMGESWLNAH 420
  421 EQYRDYYAAL YVKESWGHLL SLLTNKAQTT SSSSSSSSES SPVKGKRARE SIKRTLQAFC 480
  481 KGFDEIYTKQ SNWVVEDDKL VWKICQAMVK TVVPRYKSYL QSYIKLLVEE DPTSDSKHLY 540
  541 YTPKGLEMKL KTMFQKKEET EKRDKDSHFV NKVMDLEITQ NSRSTLEAI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 119.0
Match: 2pftA
Description: No description for 2pftA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle