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View Structure Prediction Details

Protein: gi|3096944, gi|7...
Organism: Arabidopsis thaliana
Length: 150 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|3096944, gi|7....

Description E-value Query
Range
Subject
Range
gi|38454136, gi|... - gi|41349926|gb|AAS00348.1| At4g34750 [Arabidopsis thaliana], gi|38454136|gb|AAR20762.1| At4g34750 [A...
226.0 [0..1] [150..1]
gi|162459692, gi... - gi|6906857|gb|AAF31170.1|AF148498_1 unknown [Zea mays], gi|162459692|ref|NP_001105573.1| small auxin...
154.0 [0..4] [126..19]

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Predicted Domain #1
Region A:
Residues: [1-150]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKNNKIGSV VRIRQMLKQW QKKAHIGSSN NDPVSDVPPG HVAVSVGENR RRYVVRAKHL  60
   61 NHPIFRRLLA EAEEEYGFAN VGPLAIPCDE SLFEDIIAIV TRCESSSSSG RGNPPAATLE 120
  121 DLRRCSHVGL AKNNVESRPL LPGIAEKSVC 

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 51.075721
Match: PF02519.5
Description: No description for PF02519.5 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.297 N/A N/A d.112.1 Phoshotransferase/anion transport protein
View Download 0.232 N/A N/A b.19.1 Viral protein domain
View Download 0.208 N/A N/A d.24.1 Pili subunits
View Download 0.203 N/A N/A d.108.1 Acyl-CoA N-acyltransferases (Nat)
View Download 0.202 N/A N/A d.109.1 Actin depolymerizing proteins


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle