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View Structure Prediction Details

Protein: PTR37_ARATH
Organism: Arabidopsis thaliana
Length: 558 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PTR37_ARATH.

Description E-value Query
Range
Subject
Range
PTR1_ARATH - Protein NRT1/ PTR FAMILY 8.1 OS=Arabidopsis thaliana GN=NPF8.1 PE=1 SV=1
333.0 [0..3] [544..5]

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Predicted Domain #1
Region A:
Residues: [1-382]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSVTGDAE TAISADSSTK RRGGGWITFP FMIATLLGLT IAAWGWLLNL IVYLIEEFNV  60
   61 KSIAAAQIAN IVSGCICMVP AVAAIASDSF FGTIPVISVS AFISLMGVAL LTLTASLDTL 120
  121 RPRPCETASI LCQSPSKTQL GVLYTAITLA SIGTGGTRFT LATAGANQYE KTKDQGSFFN 180
  181 WFFFTTYLAG AISATAIVYT EDNISWTLGF GLSVAANFFS FLVFVSGKRF YKHDKPLGSP 240
  241 FTSLLCVIFA ALRKRKAVVS TNEKDYHNES ITMPTKSFRF FNRAALKQED EVKPDGTIRN 300
  301 PWRLCSVQQV EDFKAVIRII PLALATIFLS TPIAMQLSLT VLQGLVMDRR LGPSFKIPAG 360
  361 SLQVITLLST CLFIIVNDRV LY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 5.69897
Match: 2gfpA
Description: No description for 2gfpA was found.

Predicted Domain #2
Region A:
Residues: [383-558]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PFYQKLTGKH LTPLQRVGIG HAFNILSMAV TAIVEAKRLK IVQKGHFLGS SSVADMSVLW  60
   61 LFPPLVIVGI GEAFHFPGNV ALCYQEFPES MRSTATSITS VVIGICFYTS TALIDLIQRT 120
  121 TAWLPDDINH GRVDNVYWIL VIGGVLNLGY FLVCSWLYRY RNLKDDDHKQ AANVSH

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.58
Match: 2v8nA
Description: No description for 2v8nA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle