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View Structure Prediction Details

Protein: gi|12322088, gi|...
Organism: Arabidopsis thaliana
Length: 399 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|12322088, gi|....

Description E-value Query
Range
Subject
Range
gi|87241279 - gi|87241279|gb|ABD33137.1| Bacterial surface antigen (D15) [Medicago truncatula]
215.0 [0..2] [399..253]

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Predicted Domain #1
Region A:
Residues: [1-399]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIEYLGSQEK EYKQRIEKAR PSRGNAYAKR SRSLSARLLH KVKERVLKWY PDQGYSFANV  60
   61 VSFGNLNSKE LIFEVMEGDI TQLVIQFQDK LGNVAEGHVL NIKVVHEAVR NIHSLGLFSN 120
  121 IEIMPIPNEK REGGVIVEVK LQETDQKSVE GSADRSIVPD PGGYPSLASS QPSGTISFEH 180
  181 PNIKGLNRSL IGSIATSNFL NPEDDLSFKL EYVHPYLDGV SNPRNRTFKT SIFNSSKLSS 240
  241 VLTGGPGFEE AVAPILMDRA AINVNGSPTT LSGMGIDRVA FLQGNITQDN TKFVNGAIVG 300
  301 ERKIIQVDQC LGDLPGYDAF SLGGPNYVRY TKGELGAARN IVELKVGAEL RVNVKNTQGY 360
  361 AFAEHGNDLG SSKDMKGNPT AAFRREGHGS SYGVGMKLG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 25.0
Match: 2qdzA
Description: No description for 2qdzA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle