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View Structure Prediction Details

Protein: FBT6_ARATH
Organism: Arabidopsis thaliana
Length: 503 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBT6_ARATH.

Description E-value Query
Range
Subject
Range
gi|67668083, gi|... - gi|67668083|ref|ZP_00465278.1| General substrate transporter:Major facilitator superfamily [Burkhold...
219.0 [0..34] [483..1018]

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Predicted Domain #1
Region A:
Residues: [1-503]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METLETEKFF SDDKPLLKPI SDHSEIKTKA RRNAVVSVLI QPFQWLQMLS SRLNLSFVLG  60
   61 VVLVYGVNQG FSGSIFKVVT DYYWKDVQQV QPSVVQLYMG LYYIPWVMRP IWGLFTDVFP 120
  121 IKGYKRKPYF VVSGVLGLVS AIAIVVLGKL PAALALSCLL GVSAAMAIAD VVIDACIATN 180
  181 SINIRSLAPD IQSLCMVCSS AGALVGYATS GVFVHQLGPQ GALGVLAFSP ATIVILGFFI 240
  241 YEKRSSTVPT QKTKKDTDGL GVAVKGMCKT VKYPEVWKPS LYMFISLALN ISTHEGHFYW 300
  301 YTDPTAGPAF SQEFVGIIYA VGALASMFGV LIYHKKLKGY SFRNILFFAQ LLYVFSGMLD 360
  361 LVFIKRWNLT LGIPDSLFVI TEESFTKMIS KIRWIPMVVL STRLCPLGIE GTFFAFLMCI 420
  421 DSFGQLASKW GGGFVLHAFG VTRHDFGNLW LVILIRNILR LVTVCFVFLV PDSDHLDDLV 480
  481 PSDVLPKKQS EDDDDDDIKL LLL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 33.30103
Match: 1pw4A
Description: Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle