| Protein: | PMTP_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 770 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PMTP_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
908.0 | [0..1] | [770..1] |
|
|
785.0 | [0..1] | [765..1] |
|
Region A: Residues: [1-190] |
1 11 21 31 41 51
| | | | | |
1 MAMGKYSRVD GKKSSSYGLT ITIVLLLSLC LVGTWMFMSS WSAPADSAGY SSTDTAKDVS 60
61 KNDLRKEEGD RDPKNFSDEK NEENEAATEN NQVKTDSENS AEGNQVNESS GEKTEAGEER 120
121 KESDDNNGDG DGEKEKNVKE VGSESDETTQ KEKTQLEEST EENKSEDGNG NEEKAEENAS 180
181 ETEESTEKSS
|
| Detection Method: |  |
| Confidence: | 4.39794 |
| Match: | 2fkjA |
| Description: | No description for 2fkjA was found. |
|
Region A: Residues: [191-309] |
1 11 21 31 41 51
| | | | | |
1 KEVFPAGDQA EITKESSTGD GAWSTQLVES QNEKKAQQSS ISKDQSSYGW KTCNVTAGPD 60
61 YIPCLDNWQA IKKLHTTMHY EHRERHCPEE SPHCLVSLPD GYKRSIKWPK SREKIWYNN
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.525 | d.169.1 | C-type lectin-like |
| View | Download | 0.525 | d.169.1 | C-type lectin-like |
| View | Download | 0.342 | a.118.9 | ENTH/VHS domain |
| View | Download | 0.342 | a.118.9 | ENTH/VHS domain |
| View | Download | 0.322 | d.73.1 | RuBisCO, small subunit |
| View | Download | 0.320 | d.58.20 | NAD-binding domain of HMG-CoA reductase |
| View | Download | 0.316 | d.58.1 | 4Fe-4S ferredoxins |
| View | Download | 0.215 | a.1.1 | Globin-like |
| View | Download | 0.212 | c.47.1 | Thioredoxin-like |
|
Region A: Residues: [310-548] |
1 11 21 31 41 51
| | | | | |
1 VPHTKLAEIK GHQNWVKMSG EHLTFPGGGT QFKNGALHYI DFIQQSHPAI AWGNRTRVIL 60
61 DVGCGVASFG GYLFERDVLA LSFAPKDEHE AQVQFALERG IPAMLNVMGT KRLPFPGSVF 120
121 DLIHCARCRV PWHIEGGKLL LELNRALRPG GFFVWSATPV YRKNEEDSGI WKAMSELTKA 180
181 MCWKLVTIKK DKLNEVGAAI YQKPTSNKCY NKRPQNEPPL CKDSDDQNAA WNVPLEACM
|
| Detection Method: | |
| Confidence: | 17.522879 |
| Match: | 1p91A |
| Description: | Crystal Structure of RlmA(I) enzyme: 23S rRNA n1-G745 methyltransferase (NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET ER19) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [549-770] |
1 11 21 31 41 51
| | | | | |
1 HKVTEDSSKR GAVWPNMWPE RVETAPEWLD SQEGVYGKPA PEDFTADQEK WKTIVSKAYL 60
61 NDMGIDWSNV RNVMDMRAVY GGFAAALKDL KLWVMNVVPV DAPDTLPIIY ERGLFGIYHD 120
121 WCESFNTYPR TYDLLHADHL FSTLRKRCNL VSVMAEIDRI LRPQGTFIIR DDMETLGEVE 180
181 KMVKSMKWKV KMTQSKDNEG LLSIEKSWWR PEETETIKSA IA
|
| Detection Method: | |
| Confidence: | 3.53 |
| Match: | 1l1eA |
| Description: | PccA |
Matching Structure (courtesy of the PDB): |
|
