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View Structure Prediction Details

Protein: RLF_ARATH
Organism: Arabidopsis thaliana
Length: 211 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RLF_ARATH.

Description E-value Query
Range
Subject
Range
gi|9758996 - gi|9758996|dbj|BAB09523.1| unnamed protein product [Arabidopsis thaliana]
227.0 [0..1] [211..65]

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Predicted Domain #1
Region A:
Residues: [1-122]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDTSRDDDFT FSKVSPPDSE VKDLASDVGS ITLKDGLDQQ KSNGLIWKDK SLPPKEETIG  60
   61 SLSFTVTDSS SSKKQSNESS ETFKTPARKP ITRTKVPFEK GYSQMDWLKL TRTHPDLAGL 120
  121 KG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [123-211]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ESNKRLIPMD EVKKHRTGDS MWTVLKGRVY NISPYMNFHP GGVDMLMKAV GRDGTLLFNK  60
   61 YHAWVNVDIL LEKCLVGVLD DTKVKKQEP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 30.154902
Match: 2ibjA
Description: No description for 2ibjA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle