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View Structure Prediction Details

Protein: ARR15_ARATH
Organism: Arabidopsis thaliana
Length: 206 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ARR15_ARATH.

Description E-value Query
Range
Subject
Range
gi|98660701 - gi|98660701|dbj|GAA02123.1| unnamed protein product [Pelotomaculum thermopropionicum SI]
178.0 [0..13] [206..100]

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Predicted Domain #1
Region A:
Residues: [1-206]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALRDLSSSL SSSSSPELHV LAVDDSFVDR KVIERLLKIS ACKVTTVESG TRALQYLGLD  60
   61 GDNGSSGLKD LKVNLIVTDY SMPGLTGYEL LKKIKESSAL REIPVVIMSS ENIQPRIEQC 120
  121 MIEGAEEFLL KPVKLADVKR LKELIMRGGE AEEGKTKKLS PKRILQNDID SSPSSSSTSS 180
  181 SSSSHDVSSL DDDTPSSKRI KLESRG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 36.69897
Match: 1kgsA
Description: PhoB; PhoB receiver domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
signal transducer activity 2.07885074402355 bayes_pls_golite062009
molecular transducer activity 2.07885074402355 bayes_pls_golite062009
transcription regulator activity 1.72455852503325 bayes_pls_golite062009
two-component response regulator activity 1.53373140048441 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle