YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|7487216, gi|3...
Organism: Arabidopsis thaliana
Length: 236 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7487216, gi|3....

Description E-value Query
Range
Subject
Range
gi|42628812 - gi|42628812|ref|ZP_00154366.1| COG0847: DNA polymerase III, epsilon subunit and related 3'-5' exonuc...
173.0 [0..6] [233..3]

Back

Predicted Domain #1
Region A:
Residues: [1-236]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVQTFPNEI VFFDLETNVP NKAGQHFHIL EFGAIIVCPK KLEELESFTT LIQPKDLSVV  60
   61 SIRSSRSDGI TRAKVTNAPS FEDVAEKIHG LLNGRIWAGH NIRRFDCVRI KEAFAEIGKA 120
  121 APEPSGIIDS LGLLSDKFGK RAGNMKMASL AAYFGLGVQK HRSLDDVRMN LEVLKHCATV 180
  181 LFLESTLPNH LEGKWHTSSK IMTRSRRNYQ IAQRAMPYSK GSLEKVIVFF SPLFKS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 24.0
Match: 1zbuA
Description: No description for 1zbuA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle