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View Structure Prediction Details

Protein: gi|15233504, gi|...
Organism: Arabidopsis thaliana
Length: 255 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15233504, gi|....

Description E-value Query
Range
Subject
Range
gi|15233526, gi|... - pir||T13440 acid phosphatase homolog T17A13.90 - Arabidopsis thaliana, gi|7269825|emb|CAB79685.1| ac...
309.0 [0..1] [254..1]

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Predicted Domain #1
Region A:
Residues: [1-255]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASLRSLSIW FFFFFVFVFL INPSISIRTS FIKLPGSDGS RYCDSWRLAA ETNNVGTWDL  60
   61 IPSICVDSVA EYLNGDQFLS DYSVIVDYAL AFAKSVEISG DGKDVWIFDI DETLLTNIDY 120
  121 YKAHGYGSEP YDDNKFSEWV EQGTAPAFDA SLRLYNALKK LGFTIILLTG RDEHQRTSTE 180
  181 TNLRDAGYSG WERLLLRGPN DQGKSATNYK SEQRSKLIEE GFKIRGNSGD QWSDLQGFAV 240
  241 ADRSFKVPNP MYYIP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 37.0
Match: 1ltqA
Description: Polynucleotide kinase, phosphatase domain; Polynucleotide kinase, kinase domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.02290994020378 bayes_pls_golite062009
hydrolase activity 0.71914501009647 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle