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View Structure Prediction Details

Protein: gi|12083272, gi|...
Organism: Arabidopsis thaliana
Length: 217 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|12083272, gi|....

Description E-value Query
Range
Subject
Range
gi|110741060 - gi|110741060|dbj|BAE98624.1| hypothetical protein [Arabidopsis thaliana]
313.0 [0..24] [217..2]

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Predicted Domain #1
Region A:
Residues: [1-217]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVMMVKVKGL IGRFWFGVGG GIVLAIVVVI IGLRGTQKAM SSTFLFSGVV PLRVRSVLTP  60
   61 ANPATDRASM ASSSGAKWAQ KTITLPPLRR GCHLITPKIL KEIREDLSDF NCGLAHVFLQ 120
  121 HTSASLTINE NYDPDVQADT ETFLNRIVPE GNSAPWRHTM EGPDDMPAHI KSSMFGCQLT 180
  181 IPITKGKLSM GTWQGIWLCE HRDAPTARRV VVTLNGI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 46.69897
Match: 1vmjA
Description: Crystal structure of hypothetical protein (TM0723) from Thermotoga maritima at 1.52 A resolution
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle