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View Structure Prediction Details

Protein: OFP1_ARATH
Organism: Arabidopsis thaliana
Length: 270 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for OFP1_ARATH.

Description E-value Query
Range
Subject
Range
OFP4_ARATH - Transcription repressor OFP4 OS=Arabidopsis thaliana GN=OFP4 PE=1 SV=1
165.0 [0..4] [262..3]

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Predicted Domain #1
Region A:
Residues: [1-194]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNNYRFKLS ELIPNAWFYK LRDMSKSKKK NLQSQPNSTT SKKKHHAVPT PTSTTPLSPR  60
   61 PPRRPSHSSK APPSHPPRKS SGNRLRHRAT VDSKSSTTSG DSTTTETGSF SPDFRSDQVL 120
  121 LPDESLTGSW HSPCSSKLSK TATFTPPPEL ELRPIITKTA ATARKTAVNS PAGVRLRMRS 180
  181 PRISVSSSAR RSGS

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.08
Match: 2j63A
Description: No description for 2j63A was found.

Predicted Domain #2
Region A:
Residues: [195-270]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SARRSRAVVK ASVDPKRDFK ESMEEMIAEN KIRATKDLEE LLACYLCLNS DEYHAIIINV  60
   61 FKQIWLDLNL PPPHSK

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 36.075721
Match: PF04844.4
Description: No description for PF04844.4 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.844 N/A N/A a.85.1 Hemocyanin, N-terminal domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle