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View Structure Prediction Details

Protein: gi|42571223, gi|...
Organism: Arabidopsis thaliana
Length: 214 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42571223, gi|....

Description E-value Query
Range
Subject
Range
RL2_CARHZ - 50S ribosomal protein L2 OS=Carboxydothermus hydrogenoformans (strain ATCC BAA-161 / DSM 6008 / Z-29...
288.0 [0..1] [212..61]

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Predicted Domain #1
Region A:
Residues: [1-214]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGLVALCRA RASASSSLFN SVIRPAFRNF STGFADTQNK SLVAQMKEEM LHMDINSMIG  60
   61 SSMPLGMMRI GTIIHNIEMN PGQGAKMVRA AGTNAKILKE PAKGKCLIKL PSGDTKWINA 120
  121 KCRATIGTVS NPSHGTKKLY KAGQSRWLGI RPKVRGVAMN PCDHPHGGGE GKSKSSGSRG 180
  181 RTSVSPWGKP CKGGYKSASV KKKKKRLAEA AAKM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 72.09691
Match: 1vsaB
Description: No description for 1vsaB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle