YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|11281675, gi|...
Organism: Arabidopsis thaliana
Length: 317 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|11281675, gi|....

Description E-value Query
Range
Subject
Range
gi|55773732, gi|... - gi|55773848|dbj|BAD72386.1| Aldose 1-epimerase-like [Oryza sativa Japonica Group], gi|55773732|dbj|B...
gi|125527132 - gi|125527132|gb|EAY75246.1| hypothetical protein OsI_03134 [Oryza sativa Indica Group]
319.0 [0..1] [312..1]

Back

Predicted Domain #1
Region A:
Residues: [1-317]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGQYATVWDQ KEASEIIKDW NGVDQVLLRN PHGASAKISL HGGQVISWRN ELGEELLFTS  60
   61 NKAIFKPPKS MRGGIQICYP QFGDCGSLDQ HGFARNKIWV IDENPPPLNS NESLGKSFVD 120
  121 LLLKPSEDDL KQWPHSFEFR LRVSLAVDGD LTLTSRIRNI NGKPFSFSFA YHTYLSVSDI 180
  181 SEVRIEGLET LDYLDNLSQR QLLTEQGDAI TFESEMDRTY LRSPKVVAVL DHERKRTYVI 240
  241 GKEGLPDTVV WNPWEKKSKT MADFGDEEYK SMLCVDGAAV ERPITLKPGE EWTGRLILTA 300
  301 VKSSFCFDQL ELQSKGF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 53.69897
Match: 2ciqA
Description: No description for 2ciqA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle