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View Structure Prediction Details

Protein: DTX14_ARATH
Organism: Arabidopsis thaliana
Length: 485 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DTX14_ARATH.

Description E-value Query
Range
Subject
Range
gi|113548993, gi... - gi|115453843|ref|NP_001050522.1| Os03g0571900 [Oryza sativa (japonica cultivar-group)], gi|113548993...
324.0 [0..18] [473..637]

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Predicted Domain #1
Region A:
Residues: [1-237]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSAEKGLLV VSDREEVNKK DGFLRETKKL SYIAGPMIAV NSSMYVLQVI SIMMVGHLGE  60
   61 LFLSSTAIAV SFCSVTGFSV VFGLASALET LCGQANGAKQ YEKLGVHTYT GIVSLFLVCI 120
  121 PLSLLWTYIG DILSLIGQDA MVAQEAGKFA TWLIPALFGY ATLQPLVRFF QAQSLILPLV 180
  181 MSSVSSLCIH IVLCWSLVFK FGLGSLGAAI AIGVSYWLNV TVLGLYMTFS SSCSKSR

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 32.60206
Match: PF01554.9
Description: No description for PF01554.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [238-485]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ATISMSLFEG MGEFFRFGIP SASMICLEWW SFEFLVLLSG ILPNPKLEAS VLSVCLSTQS  60
   61 SLYQIPESLG AAASTRVANE LGAGNPKQAR MAVYTAMVIT GVESIMVGAI VFGARNVFGY 120
  121 LFSSETEVVD YVKSMAPLLS LSVIFDALHA ALSGVARGSG RQDIGAYVNL AAYYLFGIPT 180
  181 AILLAFGFKM RGRGLWIGIT VGSCVQAVLL GLIVILTNWK KQARKARERV MGDEYEEKES 240
  241 EEEHEYIS

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 35.004365
Match: PF01554.9
Description: No description for PF01554.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle