YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|48310090, gi|...
Organism: Arabidopsis thaliana
Length: 147 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|48310090, gi|....

Description E-value Query
Range
Subject
Range
gi|12321167, gi|... - pir||C86388 hypothetical protein F28B23.12 - Arabidopsis thaliana, gi|12321167|gb|AAG50669.1|AC0798...
140.0 [0..1] [142..1]

Back

Predicted Domain #1
Region A:
Residues: [1-147]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESPRIHGGA EEKSSCESGW TMYIEDTFHG NHHSEVVYEE EDDGFSVKEV DDDGDGDEDD  60
   61 DDDDDDDSSN NESDDSMTSD ASSWPSTHQP PRSTKNHAAA KNSNAKQVNN QTENRVRDRF 120
  121 SDEGEESELK ARTRTTAASR VKVSKTK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle