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View Structure Prediction Details

Protein: LEUD3_ARATH
Organism: Arabidopsis thaliana
Length: 251 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LEUD3_ARATH.

Description E-value Query
Range
Subject
Range
gi|53751393, gi|... - gi|54297608|ref|YP_123977.1| aconitate hydratase [Legionella pneumophila str. Paris], gi|53751393|em...
242.0 [0..3] [243..601]

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Predicted Domain #1
Region A:
Residues: [1-251]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASLQSANP TLSRTLASPN KPSSFATFRS PFLRFNSTSV ASNFKPLVSR EASSSFVTRS  60
   61 AAEPQERKTF HGLCYVVGDN IDTDQIIPAE FLTLVPSNPE EYEKLGSYAL VGLPASYKER 120
  121 FVQPGEMKTK YSIIIGGENF GCGSSREHAP VCLGAAGAKA VVAQSYARIF FRNSVATGEV 180
  181 YPLDSEVRVC DECTTGDVAT VELREGDSIL INHTTGKEYK LKPIGDAGPV IDAGGIFAYA 240
  241 RKAGMIPSAA A

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Detection Method: PSI-BLAST
Confidence: 58.39794
Match: 2b3xA
Description: Structure of an orthorhombic crystal form of human cytosolic aconitase (IRP1)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
3-isopropylmalate dehydratase activity 12.5837761061391 bayes_pls_golite062009
catalytic activity 0.740488970089403 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle