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View Structure Prediction Details

Protein: DTX16_ARATH
Organism: Arabidopsis thaliana
Length: 486 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DTX16_ARATH.

Description E-value Query
Range
Subject
Range
gi|113548993, gi... - gi|115453843|ref|NP_001050522.1| Os03g0571900 [Oryza sativa (japonica cultivar-group)], gi|113548993...
331.0 [0..4] [473..622]

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Predicted Domain #1
Region A:
Residues: [1-239]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRDDRERGEG DLSWPLIGEK SSVKEEVKKQ LWLSGPLIAV SLLQFCLQVI SVMFVGHLGS  60
   61 LPLSAASIAT SFASVTGFSF LMGTASALDT LCGQAYGAKK YGMLGIQMQR AMFVLTLASI 120
  121 PLSIIWANTE HLLVFFGQNK SIATLAGSYA KFMIPSIFAY GLLQCFNRFL QAQNNVFPVV 180
  181 FCSGVTTSLH VLLCWVLVFK SGLGFQGAAL ANSISYWLNV VLLFCYVKFS PSCSLTWTG

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 44.886057
Match: PF01554.9
Description: No description for PF01554.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [240-486]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FSKEALRDIL PFLRLAVPSA LMVCLEMWSF ELLVLLSGLL PNPVLETSVL SICLNTSGTM  60
   61 WMIPFGLSGA ASTRISNELG AGNPKVAKLA VRVVICIAVA ESIVIGSVLI LIRNIWGLAY 120
  121 SSELEVVSYV ASMMPILALG NFLDSLQCVL SGVARGCGWQ KIGAIINLGS YYLVGVPSGL 180
  181 LLAFHFHVGG RGLWLGIICA LVVQVFGLGL VTIFTNWDEE AKKATNRIES SSSVKDFAVD 240
  241 DRSVVVF

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 38.638272
Match: PF01554.9
Description: No description for PF01554.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle