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View Structure Prediction Details

Protein: GAUTA_ARATH
Organism: Arabidopsis thaliana
Length: 536 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GAUTA_ARATH.

Description E-value Query
Range
Subject
Range
gi|51971923 - gi|51971923|dbj|BAD44626.1| unknown protein [Arabidopsis thaliana]
515.0 [0..1] [536..1]

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Predicted Domain #1
Region A:
Residues: [1-255]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRRGGDSFR RAGRRKISNV VWWVLSGIAL LLFFLILSKA GHIEPRPSIP KRRYRNDKFV  60
   61 EGMNMTEEML SPTSVARQVN DQIALAKAFV VIAKESKNLQ FAWDLSAQIR NSQLLLSSAA 120
  121 TRRSPLTVLE SESTIRDMAV LLYQAQQLHY DSATMIMRLK ASIQALEEQM SSVSEKSSKY 180
  181 GQIAAEEVPK SLYCLGVRLT TEWFQNLDLQ RTLKERSRVD SKLTDNSLYH FCVFSDNIIA 240
  241 TSVVVNSTAL NSKAP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [256-536]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EKVVFHLVTN EINYAAMKAW FAINMDNLRG VTVEVQKFED FSWLNASYVP VLKQLQDSDT  60
   61 QSYYFSGHND DGRTPIKFRN PKYLSMLNHL RFYIPEVFPA LKKVVFLDDD VVVQKDLSSL 120
  121 FSIDLNKNVN GAVETCMETF HRYHKYLNYS HPLIRSHFDP DACGWAFGMN VFDLVEWRKR 180
  181 NVTGIYHYWQ EKNVDRTLWK LGTLPPGLLT FYGLTEALEA SWHILGLGYT NVDARVIEKG 240
  241 AVLHFNGNLK PWLKIGIEKY KPLWERYVDY TSPFMQQCNF H

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 33.69897
Match: 1zcvA
Description: apo form of a mutant of glycogenin in which Asp159 is replaced by Asn
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.3567084433464 bayes_pls_golite062009
transferase activity 1.04375515050786 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle