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View Structure Prediction Details

Protein: TSPO_ARATH
Organism: Arabidopsis thaliana
Length: 196 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TSPO_ARATH.

Description E-value Query
Range
Subject
Range
gi|83593607, gi|... - gi|83593607|ref|YP_427359.1| TspO and MBR related proteins [Rhodospirillum rubrum ATCC 11170], gi|83...
181.0 [0..21] [193..2]

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Predicted Domain #1
Region A:
Residues: [1-196]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSQDIRYRG GDDRDAATTA MAETERKSAD DNKGKRDQKR AMAKRGLKSL TVAVAAPVLV  60
   61 TLFATYFLGT SDGYGNRAKS SSWIPPLWLL HTTCLASSGL MGLAAWLVWV DGGFHKKPNA 120
  121 LYLYLAQFLL CLVWDPVTFR VGSGVAGLAV WLGQSAALFG CYKAFNEISP VAGNLVKPCL 180
  181 AWAAFVAAVN VKLAVA

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 4.79588
Match: PF03073.6
Description: No description for PF03073.6 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle