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View Structure Prediction Details

Protein: gi|7270444, gi|1...
Organism: Arabidopsis thaliana
Length: 391 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7270444, gi|1....

Description E-value Query
Range
Subject
Range
gi|29824930 - gi|29824930|gb|AAO92349.1| Ki1 protein [Beta vulgaris]
265.0 [0..71] [383..4]

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Predicted Domain #1
Region A:
Residues: [1-107]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFFGKLADT VVSFANDSAK SVVEEVVNPT VSFANNSART VVEEVVNPTV SFANDSARTV  60
   61 VEKVLNPTVS FIDSQLQRPR DVLVQQQILD NLQESNGSNF PGDDYHS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 38.522879
Match: 2fjuB
Description: No description for 2fjuB was found.

Predicted Domain #2
Region A:
Residues: [108-391]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PDRKNWMAHL SVDKLTLNKI VWPGTHDSAT NGIGDPLVTR WLGECQTLSI FDQLVLGTRV  60
   61 LDIRFQEDRC VCHGALSSYN VDVVLNDVIR FVSETQSEII ILEIRTEFGK KDPFEFETYL 120
  121 VDKLGQFLIH QDDNLFNKPV SEILPKRVIC IWKPRESPKP SRGGILWNSD YLKDNWIDTD 180
  181 LPWTKFQSNL KHLSEQQPIS SRKFFYRVEN TVTPQADNPV VWVKQVTDRI RKHARLFISQ 240
  241 CASKGYGDKL QILSTDFIEG DFVDACVGLT HARMKGQFDK ISPS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 42.522879
Match: 2plcA
Description: PHOSPHATIDYLINOSITOL-SPECIFIC PHOSPHOLIPASE C FROM LISTERIA MONOCYTOGENES
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.693222330136336 bayes_pls_golite062009
hydrolase activity 0.17768980721334 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 0.05056572092175 bayes_pls_golite062009
phosphoric ester hydrolase activity 0.0304825793447705 bayes_pls_golite062009
phosphoric diester hydrolase activity 0.01534375493934 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle