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View Structure Prediction Details

Protein: GAUT2_ARATH
Organism: Arabidopsis thaliana
Length: 528 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GAUT2_ARATH.

Description E-value Query
Range
Subject
Range
GAUT1_ARATH - Polygalacturonate 4-alpha-galacturonosyltransferase OS=Arabidopsis thaliana GN=GAUT1 PE=1 SV=1
603.0 [0..17] [528..137]

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Predicted Domain #1
Region A:
Residues: [1-269]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDACCLKGN EDKMVPRFGH GTWIGKAFND TPEMLHERSL RQEKRLERAN ELMNDDSLQK  60
   61 LETAAMARSR SVDSAPLGNY TIWKNEYRRG KSFEDMLRLM QDQIIMARVY SGLAKFTNNL 120
  121 ALHQEIETQL MKLAWEEEST DIDQEQRVLD SIRDMGQILA RAHEQLYECK LVTNKLRAML 180
  181 QTVEDELENE QTYITFLTQL ASKALPDAIH CLTMRLNLEY HLLPLPMRNF PRRENLENPK 240
  241 LYHYALFSDN VLAASVVVNS TVMNAQDPS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [270-528]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RHVFHLVTDK LNFGAMSMWF LLNPPGEATI HVQRFEDFTW LNSSYSPVLS QLESAAMKKF  60
   61 YFKTARSESV ESGSENLKYR YPKYMSMLNH LRFYIPRIFP KLEKILFVDD DVVVQKDLTP 120
  121 LWSIDLKGKV NENFDPKFCG WAYGMNIFDL KEWKKNNITE TYHFWQNLNE NRTLWKLGTL 180
  181 PPGLITFYNL TQPLQRKWHL LGLGYDKGID VKKIERSAVI HYNGHMKPWT EMGISKYQPY 240
  241 WTKYTNFDHP YIFTCRLFE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 33.39794
Match: 1g9rA
Description: Galactosyltransferase LgtC
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.3567084433464 bayes_pls_golite062009
transferase activity 1.04375515050786 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle