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View Structure Prediction Details

Protein: ATG5_ARATH
Organism: Arabidopsis thaliana
Length: 337 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ATG5_ARATH.

Description E-value Query
Range
Subject
Range
gi|76150386, gi|... - gi|76150386|emb|CAJ31286.1| autophagy protein 5 [Zea mays], gi|162462489|ref|NP_001105827.1| autopha...
383.0 [0..7] [337..17]

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Predicted Domain #1
Region A:
Residues: [1-337]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKEAVKYVW EGAIPLQIHL HKSDVASHPA PPPALVLAPR IGYLPLLIPL IKPYFKDSLP  60
   61 PGEDSIWFDY KGFPLKWYIP TGVLFDLLCA EPERPWNLTI HFRGYPCNIL IPCEGEDSVK 120
  121 WNFVNSLKEA QYIINGNCKN VMNMSQSDQE DLWTSVMNGD LDAYTRLSPK LKMGTVEDEF 180
  181 SRKTSLSSPQ SQQVVPETEV AGQVKTARIP VRLYVRSLNK DFENLEDVPE IDTWDDISYL 240
  241 NRPVEFLKEE GKCFTLRDAI KSLLPEFMGD RAQTSGEERS IDDTEEADGS REMGEIKLVR 300
  301 IQGIEMKLEI PFSWVVNNLM NPEFYLHISV LVKAPQR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 45.39794
Match: 2dymA
Description: No description for 2dymA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle