| Protein: | NIFU4_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 283 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NIFU4_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
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315.0 | [0..1] | [280..1] |
|
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296.0 | [0..9] | [272..7] |
|
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294.0 | [0..13] | [280..5] |
|
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288.0 | [0..28] | [272..1] |
|
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284.0 | [0..32] | [279..19] |
|
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284.0 | [0..53] | [278..30] |
|
|
280.0 | [0..64] | [279..38] |
|
Region A: Residues: [1-74] |
1 11 21 31 41 51
| | | | | |
1 MKGIARLVTS LSRIGGRKVV SGTSTVTSSS SSSLLLSRRS LFISATNLLN SRTKDSALPS 60
61 LNSSLLAQKW NFLG
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.731 | d.129.1 | TATA-box binding protein-like |
| View | Download | 0.704 | d.129.1 | TATA-box binding protein-like |
| View | Download | 0.618 | d.223.1 | Polo domain |
| View | Download | 0.491 | d.82.4 | Description not found. |
| View | Download | 0.406 | d.52.8 | Description not found. |
| View | Download | 0.389 | b.81.4 | Description not found. |
| View | Download | 0.359 | d.82.1 | Copper amine oxidase, domain N |
| View | Download | 0.346 | d.129.2 | Phosphoglucomutase, C-terminal domain |
| View | Download | 0.335 | a.39.4 | Hypothetical protein MTH865 |
| View | Download | 0.335 | a.39.4 | Hypothetical protein MTH865 |
| View | Download | 0.334 | a.60.2 | RuvA domain 2-like |
| View | Download | 0.205 | d.52.5 | Probable GTPase Der, C-terminal domain |
|
Region A: Residues: [75-176] |
1 11 21 31 41 51
| | | | | |
1 GQRRTMFIQT QSTPNPSSLM FYPGKPVMEV GSADFPNVRS ALGSPLAKSI YSIDGVVRVF 60
61 FGSDFVTVTK SDDVSWDILK PEIFAAVMDF YSSGQPLFLD SQ
|
| Detection Method: | |
| Confidence: | 13.522879 |
| Match: | 1pqxA |
| Description: | Solution Structure of the Hypothetical Staphylococcus Aureus protein SAV1430. Northest Strucutral Genomics Consortium target ZR18 |
Matching Structure (courtesy of the PDB): |
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|
Region A: Residues: [177-283] |
1 11 21 31 41 51
| | | | | |
1 AAAAKDTAIS EDDSETVAMI KELLETRIRP AVQDDGGDIE YCGFDPESGI VKLRMQGACS 60
61 GCPSSSVTLK SGIENMLMHY VSEVKGVEQE FDGEDEEGTL SGEMRVE
|
| Detection Method: | |
| Confidence: | 27.0 |
| Match: | 1vehA |
| Description: | Solution structure of RSGI RUH-018, a NifU-like domain of hirip5 protein from mouse cDNA |
Matching Structure (courtesy of the PDB): |
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