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View Structure Prediction Details

Protein: ACLA3_ARATH
Organism: Arabidopsis thaliana
Length: 424 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ACLA3_ARATH.

Description E-value Query
Range
Subject
Range
gi|641970 - gi|641970|gb|AAA61787.1| succinyl-CoA synthetase beta chain
312.0 [0..4] [413..1]

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Predicted Domain #1
Region A:
Residues: [1-424]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARKKIREYD SKRLLKEHLK RLANIDLQIR SAQVTESTDF TELTNQESWL SSTKLVVKPD  60
   61 MLFGKRGKSG LVALKLDLAE VADFVKARLG TEVEMEGCKA PITTFIVEPF VPHDQEYYLS 120
  121 IVSDRLGCTI SFSECGGIEI EENWDKVKTI FLPAEKSMTL EVCAPLIATL PLEVRAKIGN 180
  181 FIMGAFAVFQ DLDFSFMEMN PFTLVDGEPF PLDMRGELDD TAAFKNFNKW GDIEFPLPFG 240
  241 RVLSSTENFI HGLDEKTSAS LKFTVLNPKG RIWTMVAGGG ASVIYADTVG DLGYASELGN 300
  301 YAEYSGAPNE EEVLQYARVV IDCATTDPDG RKRALLIGGG IANFTDVAAT FNGIIRALRE 360
  361 KETRLKASRM HIYVRRGGPN YQTGLARMRA LGEELGVPLE VYGPEATMTG ICKRAIDCIM 420
  421 LPDA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 78.221849
Match: 1jkjB
Description: Succinyl-CoA synthetase, beta-chain, C-terminal domain; Succinyl-CoA synthetase, beta-chain, N-terminal domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
ATP citrate synthase activity 3.90324332109654 bayes_pls_golite062009
ligase activity, forming carbon-carbon bonds 3.81289459554571 bayes_pls_golite062009
CoA carboxylase activity 3.76609472018505 bayes_pls_golite062009
acetyl-CoA carboxylase activity 3.48441591588603 bayes_pls_golite062009
ligase activity 3.25077459445999 bayes_pls_golite062009
succinate-CoA ligase activity 3.09962677647723 bayes_pls_golite062009
catalytic activity 2.5009559386228 bayes_pls_golite062009
biotin carboxylase activity 2.20454959516404 bayes_pls_golite062009
ligase activity, forming carbon-sulfur bonds 2.11906303325597 bayes_pls_golite062009
succinate-CoA ligase (ADP-forming) activity 1.94897701568391 bayes_pls_golite062009
CoA-ligase activity 1.70650205723619 bayes_pls_golite062009
acid-thiol ligase activity 1.65304911485061 bayes_pls_golite062009
transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer 1.34604636411023 bayes_pls_golite062009
acid-amino acid ligase activity 0.942503524309464 bayes_pls_golite062009
ligase activity, forming carbon-nitrogen bonds 0.239594107637156 bayes_pls_golite062009
glutathione synthase activity 0.158287661667506 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle