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View Structure Prediction Details

Protein: PUP1_ARATH
Organism: Arabidopsis thaliana
Length: 356 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PUP1_ARATH.

Description E-value Query
Range
Subject
Range
gi|109123815 - gi|109123815|ref|XP_001113968.1| PREDICTED: similar to solute carrier family 35, member E1 [Macaca m...
151.0 [0..20] [352..322]

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Predicted Domain #1
Region A:
Residues: [1-72]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNGLIIINC IILTIGTCGG PLLTRLYFTN GGKRIWFMSF LSTAGFPIIL IPLLVSFLSR  60
   61 RRSNRNPNNA EN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [73-204]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KRKTKLFLME TPLFIASIVI GLLTGLDNYL YSYGLAYLPV STSSLIIGTQ LAFNALFAFL  60
   61 LVKQKFTPFS INAVVLLTVG IGILALHSDG DKPAKESKKE YVVGFLMTVV AALLYAFILP 120
  121 LVELTYKKAR QE

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.12
Match: 2i68A
Description: No description for 2i68A was found.

Predicted Domain #3
Region A:
Residues: [205-356]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ITFPLVLEIQ MVMCLAATFF CVIGMFIVGD FKVIAREARE FKIGGSVFYY ALIVITGIIW  60
   61 QGFFLGAIGI VFCASSLASG VLISVLLPVT EVFAVVCFRE KFQAEKGVSL LLSLWGFVSY 120
  121 FYGEFKSGKK VVDKPQPPET ELPILPVSDY VA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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