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View Structure Prediction Details

Protein: PUP11_ARATH
Organism: Arabidopsis thaliana
Length: 379 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PUP11_ARATH.

Description E-value Query
Range
Subject
Range
PUP10_ARATH - Probable purine permease 10 OS=Arabidopsis thaliana GN=PUP10 PE=2 SV=2
152.0 [0..17] [378..17]

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Predicted Domain #1
Region A:
Residues: [1-99]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKEPVRVLV TGAAGNQEPI LVKEESVVGI PTPLLKLKSW QWWVLVSVNI FFLIGGQAAS  60
   61 VLLGRFYYDE GGNSKWMATL VQTAAFPILY IPLLLLPSS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [100-233]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ASVESSESSC SLKYIVLIYV LLGVIIAGDN MLYSVGLLYL SASTYSLICA TQLAFNAVFS  60
   61 YFINAQKFTA LILNSVVLLS FSAALIALND DADTPSGVSR SKYIVGFVCT LAASALYSLL 120
  121 LSLMQFSFEK ILKR

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.24
Match: 2i68A
Description: No description for 2i68A was found.

Predicted Domain #3
Region A:
Residues: [234-379]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ETFSVVLEMQ IYTSLVATCV SVIGLFASGE WRTLHGEMEG YHKGQASYVL TLVWTAVTWQ  60
   61 VCSVGVVGLI FLVTSLFSNV ISTLSLAVTP LAALVVFRDK MSGVKIMAML IAIWGFASYV 120
  121 YQNHIDDLKV RQARQQAQAG RVEPPC

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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