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View Structure Prediction Details

Protein: gi|10045562, gi|...
Organism: Arabidopsis thaliana
Length: 430 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|10045562, gi|....

Description E-value Query
Range
Subject
Range
gi|11276958, gi|... - gi|4733891|gb|AAD17931.2| unconventional myosin heavy chain [Zea mays], gi|162463474|ref|NP_00110492...
194.0 [0..28] [428..677]

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Predicted Domain #1
Region A:
Residues: [1-430]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKSWFSAVK KALSPEPKQK KEQKPHKSKK WFGKSKKLDV TNSGAAYSPR TVKDAKLKEI  60
   61 EEQQSRHAYS VAIATAAAAE AAVAAAQAAA EVVRLSALSR FPGKSMEEIA AIKIQTAFRG 120
  121 YMARRALRAL RGLVRLKSLV QGKCVRRQAT STLQSMQTLA RVQYQIRERR LRLSEDKQAL 180
  181 TRQLQQKHNK DFDKTGENWN DSTLSREKVE ANMLNKQVAT MRREKALAYA FSHQNTWKNS 240
  241 TKMGSQTFMD PNNPHWGWSW LERWMAARPN ENHSLTPDNA EKDSSARSVA SRAMSEMIPR 300
  301 GKNLSPRGKT PNSRRGSSPR VRQVPSEDSN SIVSFQSEQP CNRRHSTCGS IPSTRDDESF 360
  361 TSSFSQSVPG YMAPTQAAKA RARFSNLSPL SSEKTAKKRL SFSGSPKTVR RFSGPPKLES 420
  421 NVTKKDTNLA 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 37.221849
Match: 2dfsA
Description: No description for 2dfsA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle