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View Structure Prediction Details

Protein: gi|15229863, gi|...
Organism: Arabidopsis thaliana
Length: 173 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15229863, gi|....

Description E-value Query
Range
Subject
Range
gi|50936027, gi|... - gi|50936027|ref|XP_477541.1| unknown protein [Oryza sativa (japonica cultivar-group)], gi|34393878|d...
241.0 [0..1] [172..1]

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Predicted Domain #1
Region A:
Residues: [1-173]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGREVAESCV DTMLMEMVAM YSGRFYANKP ELAARRIEAI GYQVGHQLSE RYTMERPRFS  60
   61 DHLEAIKFIC KDFWSEVFKK QIDNLKTNHR GTFVLQDNKF RWLSRVSIDP SSENETQDPS 120
  121 TPGESKAAQA VSMYLYFPCG IIRGVLSNLG IPCAVSADIS SLPTCSFVIR VKA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 59.69897
Match: 2bjnA
Description: X-ray Structure of human TPC6
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle