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View Structure Prediction Details

Protein: SDHA2_ARATH
Organism: Arabidopsis thaliana
Length: 632 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SDHA2_ARATH.

Description E-value Query
Range
Subject
Range
gi|32417808, gi|... - gi|32417808|ref|XP_329382.1| hypothetical protein [Neurospora crassa], gi|28927045|gb|EAA36003.1| hy...
gi|85117365 - gi|85117365|ref|XP_965239.1| hypothetical protein [Neurospora crassa OR74A]
556.0 [0..9] [632..1151]

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Predicted Domain #1
Region A:
Residues: [1-632]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWRCLRVASS SRRSESNGAF ITSQLSRFFS APPSAGDKSS YTIVDHTYDA VVVGAGGAGL  60
   61 RAAIGLSEHG FNTACITKLF PTRSHTVAAQ GGINAALGNM SVDDWRWHMY DTVKGSDWLG 120
  121 DQDAIQYMCR EAPKAVIELE NYGLPFSRTE DGKIYQRAFG GQSLEFGIGG QAYRCACAAD 180
  181 RTGHALLHTL YGQAMKHNTQ FFVEYFALDL IMNSDGTCQG VIALNMEDGT LHRFHAGSTI 240
  241 LATGGYGRAY FSATSAHTCT GDGNAMVARA GLPLQDLEFV QFHPTGIYGA GCLITEGARG 300
  301 EGGILRNSEG EKFMDRYAPT ARDLASRDVV SRSMTMEIRQ GRGAGPMKDY LYLYLNHLPP 360
  361 EVLKERLPGI SETAAIFAGV DVTREPIPVL PTVHYNMGGI PTNYHGEVIT LRGDDPDAVV 420
  421 PGLMAAGEAA CASVHGANRL GANSLLDIVV FGRACANRVA EIQKPGEKLK PLEKDAGEKS 480
  481 IEWLDRIRNS NGSLPTSKIR LNMQRVMQNN AAVFRTQETL EEGCDLIDKT WDSFGDVKVT 540
  541 DRSMIWNSDL IETMELENLL VNACITMHSA EARKESRGAH AREDFTKRDD ANWMKHTLGY 600
  601 WEEGNVKLEY RPVHMKTLDD EVDTFPPKPR VY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 143.0
Match: 1yq3A
Description: Avian respiratory complex ii with oxaloacetate and ubiquinone
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle