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View Structure Prediction Details

Protein: gi|18417264, gi|...
Organism: Arabidopsis thaliana
Length: 206 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|18417264, gi|....

Description E-value Query
Range
Subject
Range
gi|15218843, gi|... - gi|6227016|gb|AAF06052.1|AC009513_8 Contains similarity to gb|AF123310 NAC domain protein NAM gene f...
263.0 [0..13] [204..4]

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Predicted Domain #1
Region A:
Residues: [1-206]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVEKRIVVN GGMKLPIGYR FHPTEQELIL HYLLPKAFAS PLPSSIIPVF DLFFSHPLSF  60
   61 PGDQKEKQRY FFCKKREVSS NEHRIKISSG DGYWKPIGKE RPIIACGKTF GIRRTLAFYE 120
  121 TNKSSSYCNK TRWSMTEYCL AGFASAKVSG EWAVYNVYER KGSKGRKQRK SREGDDEELR 180
  181 CIDHFTVGSN HETGPPPPSP PTSADE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 63.522879
Match: 1ut4A
Description: Structure of the conserved domain of ANAC, a member of the NAC family of transcription factors
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle