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View Structure Prediction Details

Protein: gi|20197719, gi|...
Organism: Arabidopsis thaliana
Length: 104 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|20197719, gi|....

Description E-value Query
Range
Subject
Range
gi|3096945, gi|7... - pir||T05296 probable auxin-induced protein T4L20.340 - Arabidopsis thaliana, gi|7270427|emb|CAB80193...
160.0 [0..3] [103..4]
gi|217071626, gi... - gi|92888355|gb|ABE89373.1| Auxin responsive protein [Medicago truncatula], gi|92872467|gb|ABE81082.1...
157.0 [0..1] [103..1]
gi|20149050 - gi|20149050|gb|AAM12780.1| auxin-induced SAUR-like protein [Capsicum annuum]
150.0 [0..1] [101..1]

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Predicted Domain #1
Region A:
Residues: [1-104]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVKRSSKLT QTAMLKQILK RCSSLAKNQC YDEDGLPVDV PKGHFPVYVG EKRSRYIVPI  60
   61 SFLTHPKFKS LLQQAEEEFG FNHDMGLTIP CEEVVFRSLT SMIG

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 47.30103
Match: PF02519.5
Description: No description for PF02519.5 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.815 N/A N/A a.142.1 PTS-regulatory domain, PRD


YRC Informatics Platform - Version 3.0
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