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View Structure Prediction Details

Protein: gi|29824179, gi|...
Organism: Arabidopsis thaliana
Length: 502 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|29824179, gi|....

Description E-value Query
Range
Subject
Range
DBP2_CANGA - ATP-dependent RNA helicase DBP2 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 06...
DBP2_CANGA - ATP-dependent RNA helicase DBP2 OS=Candida glabrata GN=DBP2 PE=3 SV=1
374.0 [0..5] [501..4]

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Predicted Domain #1
Region A:
Residues: [1-502]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKGDDNVQR KKNKVTRKKM SRKNDTATVS ARIAAIIAAK KRRKSGKRSM CQGMCFTLPT  60
   61 LEDPFNERQG KADITKKKKK KKKVKSREDK KPSPMSIEGV EKMDGPPKFL MLNLNEIESS 120
  121 FRKDITYSEQ HDKSLFTSSW GIEFWKCYSS GNDILDTSGM SSTVEQIAWI VSTAADAIAR 180
  181 REKDEVEEEE ELLGNSPFLL YLVPSQSKAS QVRSVCKALK GIGIHTVSLH QGAPLDHQIS 240
  241 GLKSVEPEFI VATPERLLEI VTLKGVDISN VSLLVIDELG SLCSGGYLNA VKSIKQAISS 300
  301 KHQTIVFNNS FSASIIPAVQ SFLGGSVNRV TVNESVASQG SCITQTVSVC ASEEKKLQKF 360
  361 AKHLDSSSSK LIYIVTKEES FKKIMAILKL KGISVSTSSD SKLSEVKKSR KPVAHLIDFE 420
  421 QLDTTVMRDS ETVLLPDFFP SIEIYTQILT SMARESAHGV LHSYITEKDA ASYQAGPLVN 480
  481 VLENCGQNVP DRWRNMDVAM SD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 85.69897
Match: 2db3A
Description: No description for 2db3A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle