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View Structure Prediction Details

Protein: gi|4455183, gi|7...
Organism: Arabidopsis thaliana
Length: 495 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|4455183, gi|7....

Description E-value Query
Range
Subject
Range
gi|186464325, gi... - gi|23128981|ref|ZP_00110817.1| COG2319: FOG: WD40 repeat [Nostoc punctiforme PCC 73102], gi|18668187...
551.0 [0..1] [494..1168]

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Predicted Domain #1
Region A:
Residues: [1-396]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRNETGGTMV VDLQTDPYNN IHSRHNLSYD LSEGPKPRPK FGNISKTDHD EIFPPDDPII  60
   61 INSNVTHQRF SSVSASTMSS GPASGEGSPC VMSPWARVSP PWGADFNEDN VLETNGLIGS 120
  121 IVRKEGHIYS LAASGDLLYT GSDSKNIRVW KNLKEHAGFK SSSGLIKAIV IFGDRIFTGH 180
  181 QDGKIRIWKV SKRKPGKHKR VGTLPTFKSM VKSSVNPKHF MEVRRNRNSV KTKHNDAVSS 240
  241 LSLDVELGLL YSSSWDTTIK VWRIADSKCL ESIHAHDDAI NSVMSGFDDL VFTGSADGTV 300
  301 KVWKRELQGK GTKHTLAQVL LKQENAVTAL AVKSQSSIVY CGSSDGLVNY WERSKRSFTG 360
  361 GILKGHKSAV LCLGIAGNLL LSGSADKNIC VWRRDP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 63.522879
Match: 2ovpB
Description: No description for 2ovpB was found.

Predicted Domain #2
Region A:
Residues: [397-495]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SDKSHQCLSV LTGHMGPVKC LAVEEERACH QGAKASVAEG DRKWIIYSGS LDKSVKVWRV  60
   61 SERMATWKEM DEPAASSERK SSSSPHEGSG AWSSRNVEK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 66.30103
Match: 2gnqA
Description: No description for 2gnqA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle