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View Structure Prediction Details

Protein: GONS5_ARATH
Organism: Arabidopsis thaliana
Length: 341 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GONS5_ARATH.

Description E-value Query
Range
Subject
Range
gi|109123815 - gi|109123815|ref|XP_001113968.1| PREDICTED: similar to solute carrier family 35, member E1 [Macaca m...
152.0 [0..3] [340..309]

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Predicted Domain #1
Region A:
Residues: [1-158]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEGSLWRQW TMFRSLLSIL QWWGFNVTVI IMNKWIFQKL DFKFPLSVSC VHFICSSIGA  60
   61 YIVIKVLKLK PLIVVDPEDR WRRIFPMSFV FCINIVLGNI SLRYIPVSFM QTIKSLTPAT 120
  121 TVVLQWLVWR KYFDWRIWAS LVPIVGGILL TSITELSF

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.98
Match: 2i68A
Description: No description for 2i68A was found.

Predicted Domain #2
Region A:
Residues: [159-341]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NVFGFCAALF GCLATSTKTI LAESLLHGYK FDSINTVYYM APFATMILGL PAFLLERNGI  60
   61 LDWFEAHPSP WSALIILFNS GVLAFCLNFS IFYVIQSTTA VTFNVAGNLK VAVAVFVSWM 120
  121 IFRNPISPMN AVGCGITLVG CTFYGYVRHM LSQQQPGTPR TPRTPRNKME LIPLVNDKLE 180
  181 SKI

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 32.229148
Match: PF03151.7
Description: No description for PF03151.7 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle