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View Structure Prediction Details

Protein: SPL4_ARATH
Organism: Arabidopsis thaliana
Length: 174 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPL4_ARATH.

Description E-value Query
Range
Subject
Range
SP13B_ARATH, SP1... - Squamosa promoter-binding-like protein 13B OS=Arabidopsis thaliana GN=SPL13B PE=3 SV=1, Squamosa pro...
217.0 [0..43] [168..90]

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Predicted Domain #1
Region A:
Residues: [1-174]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGKRSQGQG YMKKKSYLVE EDMETDTDEE EEVGRDRVRG SRGSINRGGS LRLCQVDRCT  60
   61 ADMKEAKLYH RRHKVCEVHA KASSVFLSGL NQRFCQQCSR FHDLQEFDEA KRSCRRRLAG 120
  121 HNERRRKSSG ESTYGEGSGR RGINGQVVMQ NQERSRVEMT LPMPNSSFKR PQIR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 32.30103
Match: 1ul4A
Description: Solution structure of the DNA-binding domain of squamosa promoter binding protein-like 4
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle