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View Structure Prediction Details

Protein: gi|15230472, gi|...
Organism: Arabidopsis thaliana
Length: 171 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15230472, gi|....

Description E-value Query
Range
Subject
Range
RLA0_RANSY - 60S acidic ribosomal protein P0 OS=Rana sylvatica GN=RPLP0 PE=2 SV=1
173.0 [0..6] [171..9]

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Predicted Domain #1
Region A:
Residues: [1-171]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASLRRALLV AGKTKINLEN CHFITGINYN GLSVKQLQEL RGILRENTNT KLLVAKNTLV  60
   61 YKALEGTKWE SLKPCMKGMN AWLFVQSEDI PAALKTFINF QKEKKLYDNN LGGAVFEEKL 120
  121 YAPQDYKVIE TMPSRADVYG MMLGSLHWPA LDLVNALQAP PAASENETVV A

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 36.69897
Match: 1zavA
Description: Ribosomal Protein L10-L12(NTD) Complex, Space Group P21
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
structural constituent of ribosome 3.24907053933923 bayes_pls_golite062009
structural molecule activity 2.96620336163367 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle