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View Structure Prediction Details

Protein: ACLB1_ARATH
Organism: Arabidopsis thaliana
Length: 608 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ACLB1_ARATH.

Description E-value Query
Range
Subject
Range
gi|73965877 - gi|73965877|ref|XP_861212.1| PREDICTED: similar to ATP-citrate synthase (ATP-citrate (pro-S-)-lyase)...
555.0 [0..6] [607..502]

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Predicted Domain #1
Region A:
Residues: [1-264]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATGQLFSRN TQALFYNYKQ LPIQRMLDFD FLCGRETPSV AGIINPGSEG FQKLFFGQEE  60
   61 IAIPVHAAIE AACAAHPTAD VFINFASFRS AAASSMAALK QPTIKVVAII AEGVPESDTK 120
  121 QLIAYARANN KVIIGPATVG GVQAGAFKIG DTAGTIDNII QCKLYRPGSV GFVSKSGGMS 180
  181 NEMYNTIARV TDGIYEGIAI GGDVFPGSTL SDHILRFNNI PQIKMVVVLG ELGGRDEYSL 240
  241 VEAMKQGKVT KPVVAWVSGT CARL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 80.0
Match: 1jkjA
Description: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain; Succinyl-CoA synthetase, alpha-chain, C-terminal domain
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [265-608]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FKSEVQFGHA GAKSGGEMES AQAKNQALQD AGATVPTSFE ALEVAIKETF DKLVEEGKVS  60
   61 PIKEVTPPQI PEDLSSAIKS GKVRAPTHII STISDDRGEE PCYAGVPMSS IIEQGYGVGD 120
  121 VISLLWFKRS LPRYCTKFIE ICIMLCADHG PCVSGAHNTI VTARAGKDLV SSLVSGLLTI 180
  181 GPRFGGAIDD AARYFKDACD RNLTPYEFVE GMKKKGIRVP GIGHRIKSRD NRDKRVELLQ 240
  241 KFARSNFPAV KYMEYAVQVE TYTLSKANNL VLNVDGAIGS LFLDLLAGSG MFTKQEIDEI 300
  301 VQIGYLNGLF VLARSIGLIG HTFDQKRLKQ PLYRHPWEDV LYTK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 78.09691
Match: 1k3pA
Description: Citrate synthase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
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