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View Structure Prediction Details

Protein: NUDT1_ARATH
Organism: Arabidopsis thaliana
Length: 147 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NUDT1_ARATH.

Description E-value Query
Range
Subject
Range
ADPP_METJA - ADP-ribose pyrophosphatase OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / ...
ADPP_METJA - ADP-ribose pyrophosphatase OS=Methanocaldococcus jannaschii GN=nudF PE=1 SV=1
116.0 [0..3] [140..36]

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Predicted Domain #1
Region A:
Residues: [1-147]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTGEAIPRV AVVVFILNGN SILLGRRRSS IGNSTFALPG GHLEFGESFE ECAAREVMEE  60
   61 TGLKIEKMKL LTVTNNVFKE APTPSHYVSV SIRAVLVDPS QEPKNMEPEK CEGWDWYDWE 120
  121 NLPKPLFWPL EKLFGSGFNP FTHGGGD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 17.69897
Match: 2fb1A
Description: Crystal structure of Hypothetical protein BT0354
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.86119802438676 bayes_pls_golite062009
hydrolase activity 0.0197788019342109 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle