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View Structure Prediction Details

Protein: gi|3193325, gi|3...
Organism: Arabidopsis thaliana
Length: 209 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|3193325, gi|3....

Description E-value Query
Range
Subject
Range
gi|2098711 - gi|2098711|gb|AAB57670.1| pectinesterase [Citrus sinensis]
167.0 [0..13] [202..40]

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Predicted Domain #1
Region A:
Residues: [1-209]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAANNKLFFV LLSLFPLIIF SATATSSKDY DTKAYVHSWC RTTLYPKLCV RSMSRYVRSR  60
   61 AVQNPRDLAR FALKASLYRA KYTKAFLLKE VKNLETTLRP QYYASVHDCL DQIRDSVNQL 120
  121 SLAIAELDRV SRRQGKSQGD LHWHINNLQT WTSTALTDAE TCVSQFPGRR MSKLKATIKG 180
  181 KVKNVEETTS NALAFIEHYA AARYRARRP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 22.522879
Match: 1xg2B
Description: Crystal structure of the complex between pectin methylesterase and its inhibitor protein
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle