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View Structure Prediction Details

Protein: gi|28372840, gi|...
Organism: Arabidopsis thaliana
Length: 154 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|28372840, gi|....

Description E-value Query
Range
Subject
Range
gi|18958058, gi|... - gi|18958058|gb|AAL79602.1| AT5g15220/F8M21_110 [Arabidopsis thaliana], gi|18417600|ref|NP_568310.1| ...
213.0 [0..1] [154..1]

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Predicted Domain #1
Region A:
Residues: [1-154]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNFLNSAASI CRRVSLRELI TEVPAYTGSS ISDGSSSGLS LVLKRWATKK TAGSTKNGRD  60
   61 SNPKFLGVKK FGGESVIPGN IIVRQRGTRF HPGDYVGIGK DHTLFALKEG RVRFEKSKIT 120
  121 GRKWIHVDPI GGHVLHPIYT KAAAAKSTKL NTAS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 32.69897
Match: 1vs6W
Description: No description for 1vs6W was found.

Predicted functions:

Term Confidence Notes
structural constituent of ribosome 9.93798084434094 bayes_pls_golite062009
structural molecule activity 9.3625249805433 bayes_pls_golite062009
peptidyltransferase activity 3.94173449567504 bayes_pls_golite062009
transferase activity, transferring amino-acyl groups 0.479709297593055 bayes_pls_golite062009
catalytic activity 0.161830442565647 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle