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View Structure Prediction Details

Protein: gi|18401997, gi|...
Organism: Arabidopsis thaliana
Length: 139 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|18401997, gi|....

Description E-value Query
Range
Subject
Range
gi|113531956, gi... - gi|8096641|dbj|BAA96212.1| unknown protein [Oryza sativa Japonica Group], gi|34904072|ref|NP_913383....
202.0 [0..1] [102..1]

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Predicted Domain #1
Region A:
Residues: [1-139]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLYDCMLLF KPIIRKEGLI DLVARIGKHV YSRNGVLTEI KSFGKVELGY GIRKLDGRHY  60
   61 QGQLMQITMM TTPNMNKELH YLNKEDKLLR WLLVKHRDIK IGQSEKEDSL TVPNRLTSGS 120
  121 LYDGSSSDED DNNILGLSR

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 4.73
Match: 1p6gF
Description: 70S ribosome functional complex
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle