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View Structure Prediction Details

Protein: DNAJ6_ARATH
Organism: Arabidopsis thaliana
Length: 284 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DNAJ6_ARATH.

Description E-value Query
Range
Subject
Range
gi|82703356, gi|... - gi|82703356|ref|YP_412922.1| heat shock protein DnaJ [Nitrosospira multiformis ATCC 25196], gi|82411...
192.0 [0..23] [213..8]

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Predicted Domain #1
Region A:
Residues: [1-107]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRKKKSRAS TTEEDEIEMD NAGPSSETSL YEVLGVERRA TSQEIRKAYH KLALKLHPDK  60
   61 NQDDKEAKDK FQQLQKVISI LGDEEKRAVY DQTGSIDDAD IPGDAFE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 21.39794
Match: 2ctwA
Description: Solution structure of J-domain from mouse DnaJ subfamily C menber 5
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [108-284]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NLRDFFRDMY KKVNEADIEE FEANYRGSES EKKDLLELFN KFKGKMNRLF CSMLCSDPKL  60
   61 DSHRFKDMLD EAIAAGEVKS SKAYEKWANK ISETKPPTSP LRKRKKKKSA AKDSETDLCL 120
  121 MIAKRQEERK GKVDSMFSSL ISRYGGDAEA EPTEEEFEAA QRRIESKRKP SKKSRGK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 11.30103
Match: 1nltA
Description: The crystal structure of Hsp40 Ydj1
Matching Structure (courtesy of the PDB):

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