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View Structure Prediction Details

Protein: gi|10177031, gi|...
Organism: Arabidopsis thaliana
Length: 273 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|10177031, gi|....

Description E-value Query
Range
Subject
Range
gi|15451042, gi|... - gi|23197624|gb|AAN15339.1| putative protein [Arabidopsis thaliana], gi|15451042|gb|AAK96792.1| putat...
193.0 [0..15] [265..62]

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Predicted Domain #1
Region A:
Residues: [1-95]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWRPWRKSSV KIHDTYSPTT ASFKDIHHLC SDDSPSFPSS PSPSPKTASR VFHRVRAANL  60
   61 ILKSWPTRQS NHLLRADSEP INLSRNQNPE SDSKQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 16.0
Match: 2diyA
Description: No description for 2diyA was found.

Predicted Domain #2
Region A:
Residues: [96-212]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SKTKTEPDVR ISIPGAEKSI VVYFTSLRVV RPTFEACKSV TSILHSFPVR IDERDLSMDA  60
   61 SFSTELQRIF GKDQNQNQNQ AKTPKLPRVF IGGRYIGGAE EVKQLHEIGE LKKLVQE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 24.522879
Match: 2ht9A
Description: No description for 2ht9A was found.

Predicted Domain #3
Region A:
Residues: [213-273]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LPKIEPGVCE MCGGHRFVPC KDCHGSHKVH TEKLGFRTCL TCNENGLVRC SSCSFPQSPP  60
   61 P

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.03
Match: 2cttA
Description: Solution structure of zinc finger domain from human DnaJ subfamily A menber 3
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle