YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: DTX49_ARATH
Organism: Arabidopsis thaliana
Length: 502 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DTX49_ARATH.

Description E-value Query
Range
Subject
Range
gi|113548993, gi... - gi|115453843|ref|NP_001050522.1| Os03g0571900 [Oryza sativa (japonica cultivar-group)], gi|113548993...
318.0 [0..21] [483..634]

Back

Predicted Domain #1
Region A:
Residues: [1-244]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAPLLMIIK NQTDHRQDPN PNPTHLSSSI QEAKSIAKIS LPLILTGLLL YSRSMISMLF  60
   61 LGRLNDLSAL SGGSLALGFA NITGYSLLSG LSIGMEPICV QAFGAKRFKL LGLALQRTTL 120
  121 LLLLCSLPIS ILWLNIKKIL LFFGQDEEIS NQAEIFILFS LPDLILQSFL HPIRIYLRSQ 180
  181 SITLPLTYSA FFAVLLHIPI NYLLVSSLGL GLKGVALGAI WTNVNLLGFL IIYIVFSGVY 240
  241 QKTW

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 45.180456
Match: PF01554.9
Description: No description for PF01554.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [245-502]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GGFSMDCFKG WRSLMKLAIP SCVSVCLEWW WYEIMILLCG LLLNPQATVA SMGILIQTTA  60
   61 LIYIFPSSLS ISVSTRVGNE LGANQPDKAR IAARTGLSLS LGLGLLAMFF ALMVRNCWAR 120
  121 LFTDEEEIVK LTSMVLPIIG LCELGNCPQT TLCGVLRGSA RPKLGANINL CCFYFVGMPV 180
  181 AVWLSFFSGF DFKGLWLGLF AAQGSCLISM LVVLARTDWE VEVHRAKELM TRSCDGDEDD 240
  241 GNTPFLLDSL DIEENLVF

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 50.823909
Match: PF01554.9
Description: No description for PF01554.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle